BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D01SP1|AL427886
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1412 1887 0.0
>3x_Contig1412
Length = 7639
Score = 1887 bits (951), Expect = 0.0
Identities = 959/961 (99%), Gaps = 1/961 (0%)
Strand = Plus / Minus
Query: 1 gatccgatagtaaaatatttgaccaaagctctgatggtactaatatatggtatctgaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 gatccgatagtaaaatatttgaccaaagctctgatggtactaatatatggtatctgaggg 2819
Query: 61 caaactctgtgtatgtccacctcgatgggaaccctgcacaagaaattctaattgtttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2818 caaactctgtgtatgtccacctcgatgggaaccctgcacaagaaattctaattgtttcca 2759
Query: 121 agacaccacatgctctaagctgtgacaaaaccataagattgtcaaacttccatgcttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2758 agacaccacatgctctaagctgtgacaaaaccataagattgtcaaacttccatgcttctt 2699
Query: 181 tgtcttcgttaggtttgatacaacgaatgtagtgaacgttagtggagttgatagtttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 tgtcttcgttaggtttgatacaacgaatgtagtgaacgttagtggagttgatagtttcca 2639
Query: 241 taagatcgatcaacgattgtttaaacatagatcctagagttggttttcttacgatttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2638 taagatcgatcaacgattgtttaaacatagatcctagagttggttttcttacgatttttc 2579
Query: 301 ttgaggctggaccgggtttcttttgactttcttgcttttgggcttgtttctctgccaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2578 ttgaggctggaccgggtttcttttgactttcttgcttttgggcttgtttctctgccaatt 2519
Query: 361 tttccgcatttttgtcaacagtttccaaaatagatagtaaagtttcgttgttagaagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2518 tttccgcatttttgtcaacagtttccaaaatagatagtaaagtttcgttgttagaagcct 2459
Query: 421 ttaacacttcaagatgtccatcagaaactgtatctctattcttttcgataaatccgtcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2458 ttaacacttcaagatgtccatcagaaactgtatctctattcttttcgataaatccgtcta 2399
Query: 481 catcataagtgacgtccaatgcataatggctaacaataaattgagtttggccgaatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2398 catcataagtgacgtccaatgcataatggctaacaataaattgagtttggccgaatcttg 2339
Query: 541 gtttggagaatacttcattagttggaggtttattcaaagtttcatatagtttatgcgtcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2338 gtttggagaatacttcattagttggaggtttattcaaagtttcatatagtttatgcgtcc 2279
Query: 601 atccttcatccgtaccagcaggtaatcttgattcttcgtctaataatgataaaataccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2278 atccttcatccgtaccagcaggtaatcttgattcttcgtctaataatgataaaataccaa 2219
Query: 661 ctttgttctcaattaagtcaatacacggttgattatcgttgaactcgataaacgaccatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2218 ctttgttctcaattaagtcaatacacggttgattatcgttgaactcgataaacgaccatt 2159
Query: 721 caatctgttcctttacgtactcctcttgttctagtttgaaaacatgttggttgaactctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 caatctgttcctttacgtactcctcttgttctagtttgaaaacatgttggttgaactctt 2099
Query: 781 gttgcaacttttcgttagcgtaattgatacagaactgttcgaaagaattcttttggaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 gttgcaacttttcgttagcgtaattgatacagaactgttcgaaagaattcttttggaaat 2039
Query: 841 gttcaaaaccatagatatccaagacaccgataaaagtatatatctcgcttaccacttcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2038 gttcaaaaccatagatatccaagacaccgataaaagtatatatctcgcttaccacttcag 1979
Query: 901 ggttacatagcacggtgtttatkttgtcccactaaccaatcgaataatgctgaatatatg 960
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 1978 ggttacatagcacggtgtttatgttgt-ccactaaccaatcgaataatgctgaatatatg 1920
Query: 961 a 961
|
Sbjct: 1919 a 1919
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7768
Number of Sequences: 1807
Number of extensions: 7768
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)